Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08707

Metabolite ID
P08707
Deionized mass
372.1366 Da
Average m/z
373.1441
Average RT
9.8951
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.293e-14
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)3.064e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.851e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)3.075e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.022e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.982e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.213e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.399e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.958e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.009e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.819e-13
Glyma.06G078000 hypothetical protein NA 1Chr06:6040154–6044900 (-)7.526e-12
Glyma.06G079500 hypothetical protein NA 1Chr06:6107326–6110770 (+)5.068e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)6.295e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.664e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.323e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.563e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.563e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)6.249e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.931e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)8.355e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.147e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)2.619e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)2.619e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.58e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)1.678e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)8.08e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.112e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)6.766e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.18e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.758e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.199e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.04e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.231e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.231e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.231e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.231e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)8.218e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)3.66e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.605e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.082e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.25e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.082e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.082e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.71e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.949e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.767e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)6.304e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)6.304e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)6.304e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)7.787e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.212e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.701e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.46e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.312e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.312e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)7.216e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)8.218e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.282e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.587e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.155e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.155e-13
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)5.712e-11
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 1Chr20:34757381–34771672 (+)8.021e-12
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)1.679e-11