Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08497

Metabolite ID
P08497
Deionized mass
600.2352 Da
Average m/z
601.2405
Average RT
9.8206
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.627e-14
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)4.67e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.632e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.01e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.431e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.719e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.719e-12
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)5.638e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)5.638e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.654e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.194e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.892e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.274e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)8.063e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.825e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)8.038e-11
Glyma.08G055400 hypothetical protein AT1G48540:AT1G48540:Outer arm dynein light chain 1 protein__AT3G17920:AT3G17920:Outer arm dynein light chain 1 protein 1Chr08:4254677–4265812 (+)6.113e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.708e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.708e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)2.833e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.705e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.705e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.705e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.606e-14
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.441e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)8.494e-12
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)1.656e-12
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)3.028e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.505e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.258e-12
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)1.679e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.632e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.375e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.618e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.74e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.74e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.071e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)7.305e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.151e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.322e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.124e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.715e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.351e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)2.489e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.203e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)6.832e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)3.622e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)3.25e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.01e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)3.066e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.576e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.576e-16
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)3.752e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.107e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.753e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.682e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)3.119e-11