Overview Annotation GWAS Evidence Associated genes

P08483

Metabolite ID
P08483
Deionized mass
402.1110 Da
Average m/z
403.1179
Average RT
9.8165
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 4Chr06:49451501–49461369 (-)1.818e-17
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.628e-13
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)3.876e-11
Glyma.06G305600 hypothetical protein NA 2Chr06:49446542–49450635 (-)1.818e-17
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.116e-15
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.324e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.628e-13
Glyma.02G143200 hypothetical protein AT3G54560:HTA11:histone H2A 11__AT4G13570:HTA4:histone H2A 4 1Chr02:14770876–14772613 (+)4.35e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.324e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.972e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.712e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.712e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.712e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.336e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.576e-12
Glyma.06G133700 Pyridoxal reductase, chloroplastic AT5G53580:PLR1:NAD(P)-linked oxidoreductase superfamily protein 1Chr06:10995438–10999422 (-)3.348e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.818e-17
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.162e-13
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.047e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.527e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.584e-12
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)1.266e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.017e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.723e-11
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)3.777e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)1.747e-13
Glyma.13G060200 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 1Chr13:15749985–15754961 (+)3.197e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.656e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.276e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.18e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.255e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.105e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.251e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.251e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.98e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.561e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.561e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.584e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.913e-11