Overview Annotation GWAS Evidence Associated genes

P08456

Metabolite ID
P08456
Deionized mass
599.2329 Da
Average m/z
600.2379
Average RT
9.8028
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G101600 hypothetical protein AT3G19740:AT3G19740:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT1G50140:AT1G50140:P-loo… 2Chr11:7680051–7698620 (+)7.547e-16
Glyma.11G101300 hypothetical protein AT1G48930:GH9C1:glycosyl hydrolase 9C1 1Chr11:7652060–7656731 (+)7.547e-16
Glyma.11G101500 hypothetical protein NA 1Chr11:7671726–7677571 (+)7.547e-16
Glyma.11G101700 hypothetical protein AT3G13530:MAPKKK7:mitogen-activated protein kinase kinase kinase 7__AT3G07980:MAPKKK6:mitogen-activated protein kinase … 1Chr11:7699698–7718725 (-)7.547e-16
Glyma.11G101900 hypothetical protein NA 1Chr11:7725153–7729037 (-)7.547e-16
Glyma.11G102100 hypothetical protein AT1G50200:ALATS:Alanyl-tRNA synthetase 1Chr11:7751843–7767715 (-)7.547e-16
Glyma.14G152100 hypothetical protein AT1G44170:ALDH3H1:aldehyde dehydrogenase 3H1 1Chr14:32968712–32985147 (+)8.912e-13