Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08366

Metabolite ID
P08366
Deionized mass
426.1687 Da
Average m/z
427.1760
Average RT
9.7721
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
93
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

93 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.981e-15
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.438e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.324e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)6.901e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.337e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)2.016e-11
Glyma.16G161500 hypothetical protein NA 2Chr16:32076715–32092322 (-)1.113e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.431e-16
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)8.65e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)2.35e-15
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)2.35e-15
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.438e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)2.308e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.033e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)9.474e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)4.78e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.648e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.114e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.114e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.114e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.114e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.114e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.114e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.114e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.438e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.438e-12
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)3.129e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.911e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)1.831e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.64e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.405e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.462e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.357e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.818e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.166e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.166e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.685e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.978e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.978e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.978e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.938e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.078e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.495e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.952e-13
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)6.961e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)7.324e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.324e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.189e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.535e-13
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)2.724e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.729e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.476e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.035e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.81e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.899e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.586e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.586e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.586e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.586e-11
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)5.511e-12
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)4.66e-13
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.992e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)6.858e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.138e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.138e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.214e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.214e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)2.455e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.309e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.309e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.647e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.647e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.815e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.815e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.815e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.815e-11
Glyma.13G184000 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 1Chr13:29775320–29779417 (+)2.565e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.288e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.733e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.244e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.8e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.355e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)4.48e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.773e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)1.653e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.939e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.497e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.237e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.203e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.23e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.051e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.431e-16
Glyma.19G026800 hypothetical protein AT3G29185:AT3G29185:glutamate NMDA receptor subunit epsilon-1, putative (DUF3598) 1Chr19:3321092–3326098 (-)3.307e-11