Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08255

Metabolite ID
P08255
Deionized mass
272.0864 Da
Average m/z
273.0944
Average RT
9.7305
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)6.53e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)7.104e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)7.104e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.883e-15
Glyma.03G091100 hypothetical protein NA 1Chr03:27025145–27034862 (-)6.124e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.302e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.418e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.705e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.768e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.79e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.79e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.455e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.887e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.887e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.887e-14
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)6.167e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.641e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.166e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.127e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.884e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.671e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)9.285e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)6.786e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.138e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.976e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.344e-13
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.344e-13
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)1.345e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)1.345e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)9.89e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.875e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.594e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.709e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)4.823e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)1.757e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.884e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.884e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.416e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.416e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.901e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.6e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.771e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.689e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.042e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.327e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.685e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.241e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.535e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.699e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.852e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)9.461e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.763e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.555e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.092e-12
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)7.412e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)7.193e-12
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)4.668e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.065e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.065e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.807e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)3.904e-11