Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08034

Metabolite ID
P08034
Deionized mass
429.1237 Da
Average m/z
430.1283
Average RT
9.6537
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)4.239e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)9.669e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.866e-14
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.461e-12
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)4.112e-12
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)4.112e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)7.294e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.725e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)3.354e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.965e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)9.45e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)9.45e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)9.45e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)9.45e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)9.45e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)9.45e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)9.45e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)7.183e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.841e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.841e-13
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)9.595e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.069e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.517e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.968e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)8.39e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.086e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.975e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.975e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.975e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)3.351e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)3.217e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)5.694e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)5.694e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)2.803e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)2.803e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)5.694e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.143e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)3.359e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)9.669e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.373e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.421e-13
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)7.123e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.961e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.961e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.961e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.961e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.222e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.66e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)8.897e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.262e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.31e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.31e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.31e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.31e-12
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)1.126e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)1.126e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)1.126e-11
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)3.296e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.577e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.913e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.866e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.593e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)9.489e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.436e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.707e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.218e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.336e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.07e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.071e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.354e-14