Overview Annotation GWAS Evidence Associated genes

P07686

Metabolite ID
P07686
Deionized mass
534.0985 Da
Average m/z
535.1051
Average RT
9.5233
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G251500 hypothetical protein AT1G44835:AT1G44835:YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 2Chr04:51829894–51834052 (+)6.751e-17
Glyma.04G251600 hypothetical protein NA 2Chr04:51834419–51837598 (-)1.041e-13
Glyma.04G250400 hypothetical protein AT1G18340:AT1G18340:basal transcription factor complex subunit-like protein 1Chr04:51686418–51692119 (+)2.761e-12
Glyma.04G251800 hypothetical protein AT1G77670:AT1G77670:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 1Chr04:51854596–51857208 (-)6.751e-17
Glyma.04G251900 hypothetical protein AT4G08250:AT4G08250:GRAS family transcription factor 1Chr04:51872753–51874821 (+)2.761e-12
Glyma.04G252800 hypothetical protein AT2G17900:SDG37:SET domain group 37 1Chr04:51939778–51946490 (-)4.193e-15
Glyma.07G192000 hypothetical protein NA 1Chr07:35937000–35942456 (-)5.391e-11
Glyma.08G351100 hypothetical protein AT5G48720:XRI1:x-ray induced transcript 1 1Chr08:46472912–46476858 (-)3.289e-11