Overview Annotation GWAS Evidence Associated genes

P07609

Metabolite ID
P07609
Deionized mass
260.0511 Da
Average m/z
261.0590
Average RT
9.4982
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)6.678e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.482e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.992e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.269e-15
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.79e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.022e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.022e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.022e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.022e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.464e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.464e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.292e-11
Glyma.16G197200 hypothetical protein NA 1Chr16:35854742–35861472 (-)5.05e-11
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)6.578e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.989e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.989e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)8.065e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.485e-12
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)3.222e-12