Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07562

Metabolite ID
P07562
Deionized mass
251.6353 Da
Average m/z
252.6412
Average RT
9.4732
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.844e-11
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)4.644e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)5.533e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.722e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)5.917e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.284e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.267e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.219e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.231e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.924e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)9.109e-13
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)1.784e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.289e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.093e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)2.747e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.994e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.417e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.844e-11
Glyma.14G172700 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 1Chr14:42719372–42727823 (+)7.299e-11
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)6.254e-12
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)1.579e-11
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)6.501e-12
Glyma.14G178600 hypothetical protein NA 1Chr14:43963455–43970275 (+)8.829e-12
Glyma.14G178700 hypothetical protein NA 1Chr14:43978407–43980052 (+)8.829e-12
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 1Chr14:43987725–44003499 (-)8.829e-12
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)6.828e-13
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)6.829e-13
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)5.414e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.627e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.369e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.627e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.627e-11
Glyma.16G140800 hypothetical protein AT3G50690:AT3G50690:Leucine-rich repeat (LRR) family protein 1Chr16:29854784–29858843 (-)5.276e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)9.988e-13
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)6.45e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.285e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)9.451e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.285e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.052e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)5.533e-11
Glyma.18G264000 hypothetical protein AT3G29270:AT3G29270:RING/U-box superfamily protein 1Chr18:54933280–54938718 (+)8.244e-11