Overview Annotation GWAS Evidence Associated genes

P07505

Metabolite ID
P07505
Deionized mass
507.1535 Da
Average m/z
508.1626
Average RT
9.4415
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
145
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

145 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)6.954e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.025e-11
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)1.991e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.916e-16
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.776e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)7.801e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.965e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.634e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)8.874e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.901e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)1.977e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.962e-17
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.962e-17
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.597e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.025e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 2Chr20:34151918–34155417 (+)1.053e-14
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.424e-13
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.991e-14
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.965e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)3.268e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.266e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.266e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)1.223e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.41e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.735e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.094e-17
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)7.006e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.413e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.335e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.701e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.534e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.534e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.447e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.67e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.67e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.67e-14
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)9.112e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.865e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)9.913e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)4.488e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.002e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.528e-13
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.362e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.634e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)3.852e-14
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)4.967e-14
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)4.967e-14
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)4.967e-14
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)4.967e-14
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 1Chr05:41087671–41089500 (+)2.176e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.111e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.79e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.864e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.136e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)2.929e-13
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)7.139e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)7.177e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.97e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.339e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.338e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.977e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.634e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.634e-11
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)7.876e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.675e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.675e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.794e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.454e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.029e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.191e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)8.66e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.901e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.901e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.901e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.901e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.826e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.703e-15
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)4.697e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)7.704e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.413e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.854e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.41e-12
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)4.825e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)5.375e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.88e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.576e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.804e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.804e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.804e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.804e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.237e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.237e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.724e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.724e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.087e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.977e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.918e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.195e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.195e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.736e-13
Glyma.13G049200 hypothetical protein AT3G02440:TBL20:TRICHOME BIREFRINGENCE-LIKE 20 1Chr13:14515169–14519326 (-)1.943e-11
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)1.943e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.916e-16
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.986e-15
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)3.283e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.525e-16
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.525e-16
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.962e-17
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.063e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.565e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.977e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.137e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.977e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.977e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.938e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.407e-16
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)6.749e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)6.749e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)9.065e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.771e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)1.473e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.776e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.137e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.127e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.247e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.52e-13
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.744e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.776e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.247e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.247e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.062e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)7.801e-12
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 1Chr17:37088115–37094715 (+)5.966e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.026e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.026e-14
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)8.801e-12
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)7.862e-11
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 1Chr20:34179794–34183432 (-)3.281e-11
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)1.374e-12
Glyma.20G100900 hypothetical protein AT3G20015:AT3G20015:Eukaryotic aspartyl protease family protein 1Chr20:34421932–34423966 (-)1.254e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)2.21e-16
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)8.12e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.524e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)7.587e-13
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)2.223e-14