Overview Annotation GWAS Evidence Associated genes

P07388

Metabolite ID
P07388
Deionized mass
276.5989 Da
Average m/z
277.6055
Average RT
9.3956
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 3Chr05:32421116–32425198 (-)4.65e-16
Glyma.05G119500 hypothetical protein AT2G13800:SERK5:somatic embryosis receptor-like kinase 5 2Chr05:31236891–31244123 (-)3.085e-12
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 2Chr09:4583416–4589291 (-)1.959e-11
Glyma.05G119300 hypothetical protein NA 1Chr05:31213190–31215641 (-)3.085e-12
Glyma.05G119600 hypothetical protein AT2G13790:SERK4:somatic embryosis receptor-like kinase 4 1Chr05:31254781–31262623 (-)2.289e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.493e-12
Glyma.05G131100 hypothetical protein AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 1Chr05:32411641–32419257 (+)1.336e-11
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 1Chr05:32446303–32473428 (+)1.473e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.85e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.456e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.456e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)6.593e-13
Glyma.07G101800 hypothetical protein NA 1Chr07:9697246–9703577 (+)8.733e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.689e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.567e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.758e-11