Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07274

Metabolite ID
P07274
Deionized mass
334.1126 Da
Average m/z
335.1208
Average RT
9.3517
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 4Chr16:144387–154780 (+)1.215e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.99e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.991e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.551e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.526e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)2.208e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.858e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)7.692e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.21e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)3.939e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.939e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.399e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.292e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)6.35e-13
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.469e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)1.38e-12
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)8.34e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.163e-11
Glyma.07G096900 GmChl 2 AT1G19670:CLH1:chlorophyllase 1 1Chr07:9083837–9085839 (-)5.806e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.153e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.323e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.323e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.323e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.323e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.201e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.364e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)2.616e-11
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)5.314e-17
Glyma.11G037400 hypothetical protein NA 1Chr11:2693616–2698160 (+)1.184e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.807e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.816e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.816e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.816e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.084e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.084e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.53e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.53e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.99e-14
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.756e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.409e-13
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)4.519e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.12e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.12e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)5.851e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.832e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.497e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.014e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)7.848e-13
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.294e-11
Glyma.16G003100 hypothetical protein AT1G09800:AT1G09800:Pseudouridine synthase family protein 1Chr16:169457–172345 (-)1.215e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.294e-11
Glyma.16G003300 hypothetical protein AT5G49960:AT5G49960:ion channel protein 1Chr16:183599–192001 (+)3.645e-12
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 1Chr16:194687–196274 (-)1.813e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)9.228e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.936e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.936e-12
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 1Chr17:11759547–11765498 (-)7.092e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)5.089e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.829e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.829e-11
Glyma.19G230000 hypothetical protein AT5G26940:DPD1:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr19:48084644–48087743 (+)7.814e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.192e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)9.963e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.111e-12