Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07199

Metabolite ID
P07199
Deionized mass
318.0857 Da
Average m/z
319.0938
Average RT
9.3236
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)3.04e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)6.441e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.843e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.404e-11
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)3.04e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)3.04e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.803e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.803e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.289e-12
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)2.529e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.989e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.35e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.116e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.116e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.854e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.563e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.563e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.563e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.488e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.284e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)7.124e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)7.124e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)7.124e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)9.542e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.329e-12
Glyma.08G147300 hypothetical protein NA 1Chr08:11238871–11242682 (+)4.604e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.923e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.179e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.202e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)1.197e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.816e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.815e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)3.111e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)3.111e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)3.111e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.434e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.766e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.937e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.848e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.243e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)7.302e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)6.515e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.821e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.821e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.599e-11