Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07058

Metabolite ID
P07058
Deionized mass
169.0191 Da
Average m/z
170.0263
Average RT
9.2745
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G068800 hypothetical protein NA 3Chr07:6211775–6221107 (-)3.996e-14
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)3.349e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.698e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.062e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.549e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.993e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.192e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.192e-13
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)2.049e-14
Glyma.02G253300 hypothetical protein NA 1Chr02:44063023–44065910 (-)3.365e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.979e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)6.855e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)4.652e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.653e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.566e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.629e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.48e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.479e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.388e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)2.224e-11
Glyma.07G068100 hypothetical protein NA 1Chr07:6135478–6137135 (+)1.359e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)8.859e-11
Glyma.07G068500 hypothetical protein AT3G54980:AT3G54980:Pentatricopeptide repeat (PPR) superfamily protein__AT2G39230:LOJ:LATERAL ORGAN JUNCTION 1Chr07:6184449–6187743 (-)8.103e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)8.859e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)6.699e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)8.859e-11
Glyma.07G070300 hypothetical protein AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein 1Chr07:6364435–6372387 (-)5.871e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)8.426e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.698e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.698e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.698e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.698e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.65e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.65e-12
Glyma.11G252400 hypothetical protein AT5G16740:AT5G16740:Transmembrane amino acid transporter family protein 1Chr11:34350993–34354500 (+)8.262e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.062e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.98e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.98e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.98e-12
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)6.612e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.216e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.322e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)2.786e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)6.323e-13
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)6.323e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.206e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)8.014e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.898e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.367e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.172e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)5.642e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.35e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.642e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)9.985e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.621e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)7.213e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.476e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.005e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.552e-16