Overview Annotation GWAS Evidence Associated genes

P06870

Metabolite ID
P06870
Deionized mass
419.1352 Da
Average m/z
420.1421
Average RT
9.2068
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.307e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.076e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.076e-12
Glyma.03G146300 hypothetical protein AT2G41980:AT2G41980:Protein with RING/U-box and TRAF-like domain 1Chr03:36161959–36166525 (+)4.207e-11
Glyma.03G146400 hypothetical protein AT2G41970:AT2G41970:Protein kinase superfamily protein 1Chr03:36170481–36174029 (+)7.722e-12
Glyma.03G146500 hypothetical protein AT2G41960:AT2G41960:uncharacterized protein 1Chr03:36181312–36189521 (+)7.722e-12
Glyma.03G146600 hypothetical protein AT2G41950:AT2G41950:DNA-directed RNA polymerase subunit beta 1Chr03:36191841–36193872 (-)4.207e-11
Glyma.03G146700 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr03:36196552–36203201 (+)2.213e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)8.559e-13
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)7.521e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)9.519e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)9.519e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.41e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)2.919e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.994e-14
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.994e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.994e-14
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)7.646e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.145e-12
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.763e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)4.777e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)1.711e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.211e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.307e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.937e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.937e-11