Overview Annotation GWAS Evidence Associated genes

P06650

Metabolite ID
P06650
Deionized mass
285.0845 Da
Average m/z
286.0905
Average RT
9.1272
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.171e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)1.6e-23
Glyma.09G250000 hypothetical protein NA 2Chr09:47096937–47099390 (-)1.757e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.171e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.34e-15
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.022e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.291e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.753e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.431e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.245e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)5.57e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)2.349e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)2.349e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)2.349e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)2.349e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.413e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.412e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.532e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)3.339e-13
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)4.45e-11
Glyma.09G249800 hypothetical protein AT3G47390:PHS1:cytidine/deoxycytidylate deaminase family protein 1Chr09:47082637–47087385 (-)1.757e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)9.994e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)9.994e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.584e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.043e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.601e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.043e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.043e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)6.94e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.887e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)7.727e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.459e-11
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)4.28e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.9e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.682e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.682e-12