Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06568

Metabolite ID
P06568
Deionized mass
296.0967 Da
Average m/z
297.1052
Average RT
9.0968
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 4Chr18:8991445–9001857 (-)2.439e-11
Glyma.03G021000 hypothetical protein NA 3Chr03:2148298–2162954 (-)1.05e-13
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)1.05e-13
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)2.748e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)5.678e-11
Glyma.18G090100 hypothetical protein NA 2Chr18:8939839–8941585 (+)2.439e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)1.125e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)3.739e-14
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)2.491e-11
Glyma.03G021100 hypothetical protein AT1G12650:AT1G12650:rRNA biosis RRP36-like protein 1Chr03:2162406–2167712 (+)7.176e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.532e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.818e-14
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.818e-14
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.818e-14
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.737e-13
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)4.122e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)4.122e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)5.055e-11
Glyma.08G328400 hypothetical protein AT4G18220:AT4G18220:Drug/metabolite transporter superfamily protein 1Chr08:44625682–44628083 (-)6.24e-11
Glyma.08G328500 hypothetical protein NA 1Chr08:44634459–44636933 (-)5.182e-12
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 1Chr12:35879106–35881779 (+)8.858e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.721e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.721e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.721e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.047e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.488e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.033e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.354e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)9.096e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.417e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.671e-12
Glyma.17G039700 hypothetical protein NA 1Chr17:2950710–2951791 (+)1.977e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.822e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.822e-11
Glyma.18G089800 hypothetical protein AT5G55250:IAMT1:IAA carboxylmethyltransferase 1 1Chr18:8921173–8925579 (+)2.439e-11
Glyma.18G090300 hypothetical protein AT5G55210:AT5G55210:uncharacterized protein 1Chr18:8954961–8957926 (+)2.439e-11
Glyma.18G090500 hypothetical protein AT4G26810:AT4G26810:SWIB/MDM2 domain superfamily protein 1Chr18:8979176–8986302 (-)2.439e-11
Glyma.18G090800 hypothetical protein AT3G20300:AT3G20300:extracellular ligand-gated ion channel protein (DUF3537) 1Chr18:9018768–9024832 (-)2.439e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)3.149e-12