Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06435

Metabolite ID
P06435
Deionized mass
162.0310 Da
Average m/z
163.0378
Average RT
9.0476
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G249500 hypothetical protein NA 3Chr10:47768548–47776631 (+)3.022e-11
Glyma.18G076300 hypothetical protein AT5G55760:SRT1:sirtuin 1 3Chr18:7229159–7242024 (-)3.022e-11
Glyma.10G284200 Ataxia telangiectasia-mutated and RAD3-related AT5G40820:ATR:Ataxia telangiectasia-mutated and RAD3-like protein 2Chr10:50451738–50464895 (-)9.624e-13
Glyma.11G241200 hypothetical protein AT5G10320:AT5G10320:ATP synthase subunit B 2Chr11:33537120–33542455 (-)1.28e-11
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 2Chr12:592967–596657 (+)1.41e-11
Glyma.12G009300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 2Chr12:675878–679976 (+)1.41e-11
Glyma.12G009400 hypothetical protein AT3G59980:AT3G59980:Nucleic acid-binding, OB-fold-like protein 2Chr12:682744–686707 (-)1.41e-11
Glyma.12G023300 hypothetical protein NA 2Chr12:1711347–1715917 (+)1.41e-11
Glyma.12G025600 hypothetical protein AT5G23210:SCPL34:serine carboxypeptidase-like 34 2Chr12:1844961–1853018 (-)1.41e-11
Glyma.15G097500 hypothetical protein NA 2Chr15:7571828–7575348 (-)1.649e-11
Glyma.15G097800 hypothetical protein NA 2Chr15:7595271–7602287 (+)1.649e-11
Glyma.15G098800 hypothetical protein AT5G18700:AT5G18700:kinase family with ARM repeat domain-containing protein 2Chr15:7678435–7686146 (-)1.649e-11
Glyma.20G141600 SUBI-1 NA 2Chr20:38036725–38039025 (+)2.606e-15
Glyma.02G097300 hypothetical protein AT1G10840:TIF3H1:translation initiation factor 3 subunit H1 1Chr02:8740317–8744368 (+)1.41e-11
Glyma.02G097400 hypothetical protein AT3G28040:AT3G28040:Leucine-rich receptor-like protein kinase family protein 1Chr02:8742027–8748911 (-)1.41e-11
Glyma.03G083300 hypothetical protein NA 1Chr03:23214945–23217446 (+)3.022e-11
Glyma.03G083600 hypothetical protein NA 1Chr03:23289648–23291767 (-)3.022e-11
Glyma.03G084200 hypothetical protein NA 1Chr03:23698481–23706813 (-)3.022e-11
Glyma.10G249300 hypothetical protein AT3G22380:TIC:time for coffee 1Chr10:47746989–47753657 (-)3.022e-11
Glyma.10G249400 hypothetical protein NA 1Chr10:47760591–47763142 (+)3.022e-11
Glyma.10G249700 hypothetical protein AT3G05970:LACS6:long-chain acyl-CoA synthetase 6 1Chr10:47786172–47795006 (-)3.022e-11
Glyma.10G249800 hypothetical protein NA 1Chr10:47797306–47805069 (-)3.022e-11
Glyma.10G281800 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr10:50284138–50287875 (+)7.542e-12
Glyma.10G282000 hypothetical protein AT2G16920:UBC23:ubiquitin-conjugating enzyme 23 1Chr10:50294239–50301335 (-)7.542e-12
Glyma.10G282100 hypothetical protein AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreductase family protein 1Chr10:50303921–50307325 (-)7.542e-12
Glyma.10G282300 hypothetical protein AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreductase family protein 1Chr10:50320024–50322909 (-)7.541e-12
Glyma.11G238500 hypothetical protein NA 1Chr11:33290540–33298235 (-)1.28e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)1.28e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)1.28e-11
Glyma.12G019500 hypothetical protein AT1G51405:AT1G51405:myosin-like protein 1Chr12:1373656–1376966 (+)1.41e-11
Glyma.12G021200 hypothetical protein NA 1Chr12:1524303–1527258 (+)1.41e-11
Glyma.12G021500 hypothetical protein AT1G50450:AT1G50450:Saccharopine dehydrogenase 1Chr12:1547281–1552018 (-)1.41e-11
Glyma.12G023500 hypothetical protein AT4G38810:AT4G38810:Calcium-binding EF-hand family protein 1Chr12:1729351–1733595 (+)1.41e-11
Glyma.12G026400 hypothetical protein AT5G23140:NCLPP7:nuclear-encoded CLP protease P7 1Chr12:1903630–1905558 (+)1.41e-11
Glyma.13G206500 hypothetical protein AT4G04880:AT4G04880:adenosine/AMP deaminase family protein 1Chr13:32017472–32022810 (-)6.966e-12
Glyma.13G308700 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr13:40427362–40435226 (-)4.031e-14
Glyma.13G309300 hypothetical protein NA 1Chr13:40509929–40514843 (+)4.031e-14
Glyma.13G309700 hypothetical protein AT1G02670:AT1G02670:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT1G05120:AT1G05120:Helic… 1Chr13:40532836–40540406 (+)4.031e-14
Glyma.14G189500 hypothetical protein AT5G24580:AT5G24580:Heavy metal transport/detoxification superfamily protein 1Chr14:45437919–45441053 (+)8.134e-12
Glyma.15G097300 hypothetical protein AT5G18650:AT5G18650:CHY-type/CTCHY-type/RING-type Zinc finger protein 1Chr15:7560205–7564106 (+)1.649e-11
Glyma.15G098000 hypothetical protein NA 1Chr15:7611677–7616750 (+)1.649e-11
Glyma.15G098300 hypothetical protein NA 1Chr15:7644193–7650617 (-)1.649e-11
Glyma.15G098400 hypothetical protein NA 1Chr15:7651712–7654753 (-)1.649e-11
Glyma.15G098500 hypothetical protein NA 1Chr15:7661297–7664066 (+)1.649e-11
Glyma.15G099000 hypothetical protein AT3G21480:AT3G21480:BRCT domain-containing DNA repair protein 1Chr15:7696817–7703070 (+)1.649e-11
Glyma.15G099500 hypothetical protein NA 1Chr15:7747286–7752481 (+)1.649e-11
Glyma.15G099600 hypothetical protein AT5G18840:AT5G18840:Major facilitator superfamily protein 1Chr15:7754389–7757430 (+)1.649e-11
Glyma.15G099900 hypothetical protein AT3G06300:P4H2:P4H isoform 2 1Chr15:7774309–7778872 (-)1.649e-11
Glyma.15G103300 hypothetical protein AT3G06170:AT3G06170:Serinc-domain containing serine and sphingolipid biosynthesis protein 1Chr15:8066381–8070490 (-)1.41e-11
Glyma.17G062700 hypothetical protein AT3G02920:RPA32B:Replication protein A, subunit RPA32 1Chr17:4829089–4834095 (-)1.41e-11
Glyma.19G125600 hypothetical protein AT1G65440:GTB1:global transcription factor group B1 1Chr19:38382184–38391933 (-)1.41e-11
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)1.41e-11
Glyma.19G126500 hypothetical protein AT2G40930:UBP5:ubiquitin-specific protease 5 1Chr19:38503103–38515850 (-)1.41e-11
Glyma.19G126600 hypothetical protein NA 1Chr19:38519657–38524877 (-)1.41e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)7.497e-11
Glyma.20G139100 hypothetical protein NA 1Chr20:37838389–37841836 (-)9.344e-15
Glyma.20G142800 hypothetical protein NA 1Chr20:38121661–38124824 (-)2.533e-11