Overview Annotation GWAS Evidence Associated genes

P06424

Metabolite ID
P06424
Deionized mass
163.0339 Da
Average m/z
164.0412
Average RT
9.0421
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)9.742e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.038e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.038e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.038e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.038e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.577e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.592e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.296e-15
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.296e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.076e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.346e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.247e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.946e-11