Overview Annotation GWAS Evidence Associated genes

P06420

Metabolite ID
P06420
Deionized mass
253.0914 Da
Average m/z
254.1008
Average RT
9.0381
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 3Chr16:29468438–29472890 (-)3.145e-18
Glyma.16G180100 hypothetical protein NA 2Chr16:34070806–34076053 (+)1.103e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.536e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)3.453e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.374e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)9.46e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.597e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.597e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)6.503e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)6.428e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)2.209e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)2.209e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)3.201e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.122e-15
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)5.106e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.824e-18
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)1.103e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.574e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.536e-11
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)2.943e-11