Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06334

Metabolite ID
P06334
Deionized mass
317.1567 Da
Average m/z
318.1641
Average RT
8.9981
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.586e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.737e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.147e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.404e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.131e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.586e-16
Glyma.02G125700 hypothetical protein NA 1Chr02:12589185–12591860 (-)1.13e-12
Glyma.02G126300 hypothetical protein NA 1Chr02:12670653–12677305 (+)4.29e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)4.29e-11
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain co… 1Chr02:12771578–12777488 (+)4.29e-11
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)4.29e-11
Glyma.02G127600 hypothetical protein NA 1Chr02:12976382–12983547 (+)4.29e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)9.575e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.377e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.612e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.612e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.612e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.022e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.737e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.737e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.737e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.737e-14
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.854e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)4.648e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.705e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.705e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.705e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.705e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.302e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.372e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.556e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.556e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.147e-12
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)9.11e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.718e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.524e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.501e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.486e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.024e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.841e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.841e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.451e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.05e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)4.457e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.824e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.509e-11