Overview Annotation GWAS Evidence Associated genes

P06252

Metabolite ID
P06252
Deionized mass
533.2083 Da
Average m/z
534.2126
Average RT
8.9568
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.299e-12
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)8.963e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)9.034e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)9.034e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.356e-13
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)1.658e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)1.658e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.472e-12
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)9.547e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.503e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)9.33e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.979e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.979e-13