Overview Annotation GWAS Evidence Associated genes

P05986

Metabolite ID
P05986
Deionized mass
253.1223 Da
Average m/z
254.1300
Average RT
8.8677
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G164700 hypothetical protein NA 3Chr05:35543931–35549196 (-)1.374e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.396e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.437e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.724e-12
Glyma.05G164800 hypothetical protein NA 1Chr05:35549831–35557199 (-)3.131e-11
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)9.237e-13
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)9.237e-13
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)9.237e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.463e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.463e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.397e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.665e-13
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.665e-13
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 1Chr18:48365045–48368299 (-)2.754e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.566e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.566e-11