Overview Annotation GWAS Evidence Associated genes

P05956

Metabolite ID
P05956
Deionized mass
531.1934 Da
Average m/z
532.2005
Average RT
8.8628
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)4.097e-12
Glyma.16G137800 hypothetical protein NA 2Chr16:29480352–29487400 (-)6.967e-11
Glyma.20G218500 hypothetical protein AT4G10465:AT4G10465:Heavy metal transport/detoxification superfamily protein__AT2G18196:AT2G18196:Heavy metal transport… 2Chr20:45428471–45432099 (+)2.951e-13
Glyma.20G218700 hypothetical protein AT5G47520:RABA5a:RAB GTPase homolog A5A 2Chr20:45447355–45452750 (-)4.3e-12
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.844e-12
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.844e-12
Glyma.07G014300 hypothetical protein NA 1Chr07:1115661–1120213 (-)4.398e-12
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.642e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.642e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)6.785e-11
Glyma.16G137900 hypothetical protein NA 1Chr16:29480980–29481438 (+)6.968e-11