Overview Annotation GWAS Evidence Associated genes

P05439

Metabolite ID
P05439
Deionized mass
310.6261 Da
Average m/z
311.6305
Average RT
8.7314
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.856e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.938e-13
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)2.385e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.322e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)2.463e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)4.933e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.618e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.742e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.549e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.549e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.44e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.784e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)2.561e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.408e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.986e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.803e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.578e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.578e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.576e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.901e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.576e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.576e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.241e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.972e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)9.223e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.541e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.541e-11
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)6.556e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.918e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.918e-15