P05438
Metabolite ID
P05438
Deionized mass
519.2033 Da
Average m/z
520.2093
Average RT
8.7313
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.07G100400 | hypothetical protein | AT3G18050:AT3G18050:GPI-anchored protein | 3 | Chr07:9523110–9526319 (+) | 8.376e-13 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 4.014e-13 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 3 | Chr19:1134716–1143232 (+) | 1.154e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 2 | Chr06:50191600–50203098 (-) | 8.548e-13 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 8.916e-11 | |
| Glyma.10G263800 | hypothetical protein | AT1G23010:LPR1:Cupredoxin superfamily protein | 2 | Chr10:48805999–48811533 (-) | 7.262e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 3.897e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.75e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.75e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.301e-12 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 5.087e-11 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 1.903e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 2.229e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.843e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.843e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 1.15e-11 | |
| Glyma.03G016700 | hypothetical protein | AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr03:1683395–1688893 (-) | 5.056e-11 | |
| Glyma.03G018600 | hypothetical protein | AT2G45695:AT2G45695:Ubiquitin related modifier 1 | 1 | Chr03:1859210–1862572 (-) | 5.151e-11 | |
| Glyma.03G018800 | hypothetical protein | AT2G45680:TCP9:TCP family transcription factor | 1 | Chr03:1875182–1876855 (+) | 9.27e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 2.726e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 4.712e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 9.721e-12 | |
| Glyma.03G169700 | hypothetical protein | AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… | 1 | Chr03:38442950–38448706 (+) | 1.648e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 4.609e-13 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 1.329e-11 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 1 | Chr04:7187985–7192897 (+) | 7.05e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 2.917e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 4.595e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 2.154e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 2.154e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.704e-16 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.844e-16 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.844e-16 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.844e-16 | |
| Glyma.05G131200 | hypothetical protein | AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr05:32421116–32425198 (-) | 5.791e-11 | |
| Glyma.05G149200 | hypothetical protein | NA | 1 | Chr05:34347910–34353885 (-) | 5.496e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 3.839e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.45e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.176e-22 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 7.877e-15 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 4.555e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.134e-15 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.134e-15 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 4.29e-14 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 6.071e-14 | |
| Glyma.06G200200 | hypothetical protein | NA | 1 | Chr06:18327920–18331068 (-) | 2.852e-11 | |
| Glyma.06G305200 | hypothetical protein | AT3G21690:AT3G21690:MATE efflux family protein | 1 | Chr06:49420013–49426780 (-) | 4.951e-13 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 3.355e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 2.94e-12 | |
| Glyma.07G071800 | hypothetical protein | AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein | 1 | Chr07:6523253–6526707 (+) | 2.441e-11 | |
| Glyma.07G075000 | hypothetical protein | AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein | 1 | Chr07:6821674–6829551 (-) | 2.499e-11 | |
| Glyma.07G075300 | hypothetical protein | NA | 1 | Chr07:6843882–6845602 (-) | 2.499e-11 | |
| Glyma.07G093700 | hypothetical protein | AT3G18290:BTS:zinc finger protein-like protein | 1 | Chr07:8723740–8734056 (-) | 2.908e-12 | |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 2.338e-11 | |
| Glyma.08G117700 | hypothetical protein | NA | 1 | Chr08:9080318–9084658 (-) | 8.824e-11 | |
| Glyma.08G119300 | hypothetical protein | AT1G29330:ERD2:ER lumen protein retaining receptor family protein | 1 | Chr08:9198213–9201688 (-) | 4.974e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 8.916e-11 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 8.916e-11 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 8.916e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 8.916e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 2.639e-11 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 4.154e-11 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 6.263e-13 | |
| Glyma.10G266400 | hypothetical protein | NA | 1 | Chr10:48984735–48993690 (+) | 9.199e-12 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 9.135e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 4.264e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 4.264e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 3.991e-13 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 3.991e-13 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 6.897e-12 | |
| Glyma.12G186200 | hypothetical protein | AT3G44350:NAC061:NAC domain containing protein 61 | 1 | Chr12:34708678–34710549 (+) | 1.402e-11 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 4.212e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.42e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 3.42e-12 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 3.897e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 5.4e-14 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 5.399e-14 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.75e-14 | |
| Glyma.13G185400 | hypothetical protein | NA | 1 | Chr13:29936606–29937420 (+) | 2.805e-11 | |
| Glyma.14G013500 | hypothetical protein | AT4G25434:NUDT10:nudix hydrolase homolog 10 | 1 | Chr14:1009519–1014238 (+) | 3.746e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 2.035e-13 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 7.323e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 1.221e-13 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 2.188e-16 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 5.087e-11 | |
| Glyma.14G213400 | hypothetical protein | NA | 1 | Chr14:47844823–47847028 (+) | 2.166e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 4.842e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 6.476e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 4.842e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 4.842e-11 | |
| Glyma.16G058100 | hypothetical protein | AT5G14180:MPL1:Myzus persicae-induced lipase 1 | 1 | Chr16:5685464–5692098 (+) | 9.509e-11 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 7.119e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 8.834e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 3.778e-12 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 6.925e-14 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 2.875e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 3.921e-11 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 3.921e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 1.589e-13 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 2.229e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 2.445e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 2.444e-11 | |
| Glyma.20G223300 | hypothetical protein | AT1G09770:CDC5:cell division cycle 5 | 1 | Chr20:45791239–45803369 (-) | 5.658e-11 |