Overview Annotation GWAS Evidence Associated genes

P05401

Metabolite ID
P05401
Deionized mass
98.0362 Da
Average m/z
99.0435
Average RT
8.7200
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.374e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.994e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.44e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.373e-13
Glyma.10G238000 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr10:46649889–46654561 (-)1.842e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.029e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)2.123e-12