Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05379

Metabolite ID
P05379
Deionized mass
214.0578 Da
Average m/z
215.0655
Average RT
8.7155
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)2.324e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.476e-13
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.771e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.009e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.009e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.164e-12
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.043e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.751e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.752e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.816e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.815e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.815e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.815e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.816e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.816e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.816e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.772e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.802e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.138e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.818e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.429e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.327e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.733e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)5.748e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)7.087e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)4.399e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.399e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.81e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.324e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.823e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.355e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.556e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.556e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.556e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.556e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)6.644e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)6.644e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)6.644e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.985e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.984e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.498e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.498e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.212e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.212e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.009e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.645e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)9.644e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.164e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.221e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)7.867e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)5.388e-12
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)5.388e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.205e-16
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)4.153e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.147e-11
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 1Chr18:495989–502111 (-)1.607e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.12e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.12e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.357e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.609e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.298e-12
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)2.859e-11