Overview Annotation GWAS Evidence Associated genes

P05180

Metabolite ID
P05180
Deionized mass
255.0668 Da
Average m/z
256.0758
Average RT
8.6404
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)5.649e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)8.303e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.039e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.19e-11
Glyma.05G169100 hypothetical protein NA 1Chr05:35959241–35961911 (+)7.364e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.333e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.006e-11
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 1Chr06:12052122–12056526 (-)1.049e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)2.307e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.943e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.943e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.19e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.836e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.836e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.836e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)5.594e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.465e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.33e-11
Glyma.17G217900 hypothetical protein NA 1Chr17:36771760–36778616 (-)4.856e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)8.303e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)8.567e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)6.361e-11
Glyma.20G149200 hypothetical protein AT3G22790:NET1A:Kinase interacting (KIP1-like) family protein 1Chr20:38788867–38796629 (+)5.426e-11