Overview Annotation GWAS Evidence Associated genes

P04856

Metabolite ID
P04856
Deionized mass
105.9840 Da
Average m/z
106.9911
Average RT
8.4148
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G098200 hypothetical protein AT5G18680:TLP11:tubby like protein 11 2Chr15:7632350–7637574 (-)4.016e-12
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)2.53e-14
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)9.839e-12
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)1.29e-12
Glyma.06G126300 hypothetical protein NA 1Chr06:10331312–10341252 (-)6.255e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)1.464e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)6.655e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.659e-12