Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04853

Metabolite ID
P04853
Deionized mass
222.1072 Da
Average m/z
223.1149
Average RT
8.4124
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)9.473e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.235e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.358e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)3.79e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.182e-16
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.182e-11
Glyma.16G018000 hypothetical protein NA 2Chr16:1601748–1607341 (-)7.636e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)2.01e-14
Glyma.18G196600 hypothetical protein NA 2Chr18:47245495–47254950 (+)5.552e-11
Glyma.18G197100 hypothetical protein NA 2Chr18:47324304–47331665 (+)5.552e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)5.303e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)5.303e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.788e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.463e-13
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.415e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.898e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.707e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.614e-16
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.522e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.773e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)4.111e-13
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)5.997e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)1.84e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)8.692e-11
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)6.195e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.235e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.235e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.24e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.854e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)3.551e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)8.318e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)4.044e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.323e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.323e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.358e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)6.457e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.484e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)4.186e-11
Glyma.13G199800 hypothetical protein NA 1Chr13:31353786–31356378 (+)1.26e-11
Glyma.14G084200 hypothetical protein NA 1Chr14:7375402–7379417 (-)3.233e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.264e-12
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.264e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.976e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.182e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.063e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.438e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.438e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.238e-14
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)5.501e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.358e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.952e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.952e-13
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)2.099e-11
Glyma.18G196800 hypothetical protein NA 1Chr18:47251025–47251837 (+)5.552e-11
Glyma.18G197300 hypothetical protein AT3G09050:AT3G09050:8-amino-7-oxononanoate synthase 1Chr18:47329987–47330952 (-)5.552e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)6.122e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.061e-11
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)1.926e-12