Overview Annotation GWAS Evidence Associated genes

P04813

Metabolite ID
P04813
Deionized mass
239.0807 Da
Average m/z
240.0875
Average RT
8.3778
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.255e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.137e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.137e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.577e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.235e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)7.769e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.769e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)6.689e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.761e-11