Overview Annotation GWAS Evidence Associated genes

P04778

Metabolite ID
P04778
Deionized mass
428.1482 Da
Average m/z
429.1556
Average RT
8.3467
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G020400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 1Chr03:2078755–2084370 (+)4.254e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.522e-11
Glyma.06G163500 hypothetical protein NA 1Chr06:13499061–13502150 (+)3.308e-12
Glyma.06G163700 hypothetical protein NA 1Chr06:13525005–13527552 (-)3.201e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)9.42e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.593e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)5.835e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)6.954e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.884e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.514e-11
Glyma.16G059600 hypothetical protein NA 1Chr16:5815769–5818052 (-)9.285e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)7.231e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)5.912e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)2.15e-12
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)3.476e-14
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)3.476e-14