Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04755

Metabolite ID
P04755
Deionized mass
324.1283 Da
Average m/z
325.1352
Average RT
8.3236
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.864e-12
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)5.436e-13
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)1.384e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 3Chr16:35831912–35835153 (+)2.594e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 3Chr16:36943073–36948828 (+)2.196e-11
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.33e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.577e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)8.928e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.343e-11
Glyma.16G219000 hypothetical protein NA 2Chr16:37634112–37638596 (-)9.071e-12
Glyma.17G208400 hypothetical protein NA 2Chr17:34184145–34222159 (-)4.997e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.32e-14
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)5.813e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)7.026e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)5.436e-13
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)6.568e-12
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)6.568e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)5.029e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.494e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.737e-13
Glyma.01G171900 hypothetical protein AT5G66460:MAN7:Glycosyl hydrolase superfamily protein 1Chr01:50912520–50915454 (-)7.237e-11
Glyma.01G172900 hypothetical protein NA 1Chr01:51020276–51025649 (-)7.237e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.152e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)6.634e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.305e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.755e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)4.479e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.117e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.124e-24
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.314e-18
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.993e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.993e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)6.307e-11
Glyma.06G145500 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr06:11873447–11878561 (-)4.12e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.918e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)4.611e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.043e-13
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.043e-13
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)1.628e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)7.345e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)6.943e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.964e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.024e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.024e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.024e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.024e-11
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)8.203e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)4.583e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)4.493e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)9.869e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.014e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.346e-15
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)5.346e-15
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.346e-15
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.565e-12
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)1.384e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)1.636e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.354e-13
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.354e-13
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)1.785e-11
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)1.785e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.928e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.402e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.39e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.807e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.579e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.935e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.5e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.465e-11
Glyma.17G064100 hypothetical protein AT5G57490:VDAC4:voltage dependent anion channel 4 1Chr17:4930968–4937489 (-)3.738e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)4.356e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)5.715e-15
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)5.715e-15
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)5.715e-15
Glyma.17G207000 hypothetical protein NA 1Chr17:33925621–33935113 (+)4.997e-12
Glyma.17G208500 hypothetical protein NA 1Chr17:34224093–34230310 (-)4.997e-12
Glyma.17G209600 hypothetical protein AT2G25530:AT2G25530:AFG1-like ATPase family protein 1Chr17:34571688–34581787 (-)4.997e-12
Glyma.17G209700 hypothetical protein NA 1Chr17:34586468–34590309 (+)4.997e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.278e-14
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)3.483e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)6.13e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)9.276e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)3.78e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.558e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.603e-13
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)7.741e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)6.435e-12
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)1.852e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)7.054e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.901e-12
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)2.813e-13
Glyma.20G110900 hypothetical protein NA 1Chr20:35311096–35312894 (-)1.222e-11
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)8.335e-12
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)5.379e-11