Overview Annotation GWAS Evidence Associated genes

P04731

Metabolite ID
P04731
Deionized mass
327.5896 Da
Average m/z
328.5969
Average RT
8.3052
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)3.404e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.679e-11
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)1.577e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.308e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.914e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.526e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.445e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.124e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.124e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.124e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.124e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)3.788e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.253e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)3.788e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.718e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.679e-11
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)8.664e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)4.057e-11