Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04670

Metabolite ID
P04670
Deionized mass
360.0664 Da
Average m/z
361.0716
Average RT
8.2685
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G212500 hypothetical protein AT2G33735:AT2G33735:Chaperone DnaJ-domain superfamily protein 1Chr02:39851468–39854914 (-)4.437e-11
Glyma.02G213100 hypothetical protein NA 1Chr02:39917394–39920713 (-)8.814e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.05e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.493e-14
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)1.745e-12
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)5.173e-12
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)5.173e-12
Glyma.06G132300 hypothetical protein AT5G24350:AT5G24350:neuroblastoma-amplified sequence protein 1Chr06:10895966–10910088 (+)5.889e-12
Glyma.06G132500 hypothetical protein AT4G27720:AT4G27720:Major facilitator superfamily protein 1Chr06:10914956–10919016 (-)3.656e-12
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)1.515e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)1.515e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)4.816e-13
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.267e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)1.201e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.153e-11
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)2.822e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)2.822e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.481e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.294e-11
Glyma.16G198800 hypothetical protein NA 1Chr16:36006373–36020152 (-)1.545e-12
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)9.3e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.203e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.203e-13