Overview Annotation GWAS Evidence Associated genes

P04469

Metabolite ID
P04469
Deionized mass
247.0614 Da
Average m/z
248.0683
Average RT
8.1302
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G172800 hypothetical protein AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein 3Chr16:33359317–33362446 (+)1.46e-12
Glyma.05G004600 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr05:398853–402990 (-)2.952e-11
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 1Chr05:31585853–31588967 (-)2.83e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.474e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.164e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.164e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.164e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.164e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.983e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.234e-13
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.19e-11
Glyma.11G058400 hypothetical protein NA 1Chr11:4409851–4413688 (+)1.878e-12
Glyma.11G061200 hypothetical protein AT5G66560:AT5G66560:Phototropic-responsive NPH3 family protein 1Chr11:4583941–4587288 (+)8.967e-11
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)1.277e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.12e-12