Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04332

Metabolite ID
P04332
Deionized mass
154.0703 Da
Average m/z
155.0779
Average RT
8.0902
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.604e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.604e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.06e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.432e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.42e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.347e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.347e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.254e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)8.906e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.694e-13
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)3.456e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.462e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.823e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.841e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)2.865e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.402e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.402e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.656e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)9.339e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)9.685e-13
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.581e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.554e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.554e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.359e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.359e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.62e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.434e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.162e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.162e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.604e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.806e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)5.154e-11
Glyma.14G045000 hypothetical protein AT5G20950:AT5G20950:Glycosyl hydrolase family protein 1Chr14:3430845–3435477 (-)9.922e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.962e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.432e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.147e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.228e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.09e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.228e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.228e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.212e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.285e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.393e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.096e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.351e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.064e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.064e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.42e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.144e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.144e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)8.855e-11
Glyma.18G262800 hypothetical protein NA 1Chr18:54832649–54833890 (+)9.613e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.48e-14
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)2.509e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.156e-15
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)5.146e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.821e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.364e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.252e-13