Overview Annotation GWAS Evidence Associated genes

P04316

Metabolite ID
P04316
Deionized mass
970.2735 Da
Average m/z
486.1412
Average RT
8.0836
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G040600 hypothetical protein AT5G53310:AT5G53310:myosin heavy chain-like protein 5Chr13:12931343–12943367 (+)5.374e-11
Glyma.09G151800 hypothetical protein AT5G51740:AT5G51740:Peptidase family M48 family protein 2Chr09:37420162–37423631 (-)2.355e-12
Glyma.12G017900 hypothetical protein AT2G21045:AT2G21045:Rhodanese/Cell cycle control phosphatase superfamily protein 1Chr12:1249545–1251231 (+)3.982e-13
Glyma.12G023600 hypothetical protein NA 1Chr12:1733920–1735494 (-)3.841e-11
Glyma.13G039900 hypothetical protein AT5G24100:AT5G24100:Leucine-rich repeat protein kinase family protein 1Chr13:12319075–12321626 (+)5.374e-11
Glyma.13G040300 hypothetical protein AT5G53280:PDV1:plastid division1 1Chr13:12624680–12630761 (+)5.374e-11
Glyma.13G040900 hypothetical protein NA 1Chr13:13017722–13018923 (+)5.374e-11
Glyma.13G041100 hypothetical protein NA 1Chr13:13133244–13137306 (+)5.374e-11
Glyma.13G041200 hypothetical protein AT5G24120:SIGE:sigma factor E 1Chr13:13162176–13168574 (+)5.374e-11
Glyma.13G041700 hypothetical protein AT5G53170:FTSH11:FTSH protease 11 1Chr13:13342215–13357011 (+)5.374e-11
Glyma.13G042200 hypothetical protein NA 1Chr13:13542395–13551520 (-)5.374e-11
Glyma.17G244200 hypothetical protein AT2G26560:PLA2A:phospholipase A 2A 1Chr17:39960277–39964490 (-)8.744e-12