Overview Annotation GWAS Evidence Associated genes

P04241

Metabolite ID
P04241
Deionized mass
205.0948 Da
Average m/z
206.1003
Average RT
8.0424
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G011800 hypothetical protein AT4G30890:UBP24:ubiquitin-specific protease 24 2Chr12:857542–865232 (+)2.059e-19
Glyma.10G089200 hypothetical protein AT3G60830:ARP7:actin-related protein 7 1Chr10:11895964–11919791 (-)1.893e-15
Glyma.10G102200 hypothetical protein AT3G56720:AT3G56720:pre-mRNA-splicing factor 1Chr10:20664183–20683277 (-)7.615e-26
Glyma.10G104900 hypothetical protein AT5G06120:AT5G06120:ARM repeat superfamily protein 1Chr10:23097354–23157754 (-)7.615e-26
Glyma.10G119900 hypothetical protein NA 1Chr10:30516480–30519657 (-)7.569e-13
Glyma.10G121300 hypothetical protein NA 1Chr10:30941063–30945638 (-)7.569e-13
Glyma.10G125800 hypothetical protein NA 1Chr10:33085373–33085855 (-)7.569e-13
Glyma.12G010300 hypothetical protein AT3G63460:AT3G63460:transducin family protein / WD-40 repeat family protein__AT1G18830:AT1G18830:Transducin/WD40 repeat… 1Chr12:737377–747849 (+)2.472e-12
Glyma.12G013400 hypothetical protein AT5G17520:RCP1:root cap 1 (RCP1) 1Chr12:970258–974669 (+)1.403e-12
Glyma.12G013500 hypothetical protein NA 1Chr12:976612–977910 (+)1.403e-12
Glyma.12G014400 hypothetical protein AT1G64980:CDI:Nucleotide-diphospho-sugar transferases superfamily protein 1Chr12:1039859–1041301 (-)1.403e-12
Glyma.12G014700 hypothetical protein NA 1Chr12:1066217–1070263 (+)1.478e-11
Glyma.12G015100 hypothetical protein NA 1Chr12:1092653–1096887 (+)1.478e-11
Glyma.12G015300 hypothetical protein NA 1Chr12:1100879–1104057 (+)1.478e-11
Glyma.12G015600 hypothetical protein AT5G16650:AT5G16650:Chaperone DnaJ-domain superfamily protein 1Chr12:1117363–1121163 (+)1.478e-11
Glyma.12G046700 hypothetical protein AT2G16070:PDV2:plastid division2 1Chr12:3390831–3393790 (+)4.646e-31