Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04232

Metabolite ID
P04232
Deionized mass
497.1416 Da
Average m/z
498.1524
Average RT
8.0373
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G172600 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 3Chr14:42702411–42715516 (+)2.539e-13
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 3Chr14:43637893–43642553 (+)1.187e-15
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)6.246e-11
Glyma.08G338900 hypothetical protein NA 2Chr08:45536950–45543029 (-)1.39e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.016e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.463e-16
Glyma.14G172700 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 2Chr14:42719372–42727823 (+)3.92e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)3.702e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.467e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.831e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.006e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)7.925e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)7.925e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)9.828e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.463e-16
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)2.584e-11
Glyma.14G172900 hypothetical protein NA 1Chr14:42766407–42769069 (+)2.539e-13
Glyma.14G174200 GmCRY1c1 AT4G08920:CRY1:cryptochrome 1 1Chr14:42984699–42990498 (+)1.458e-11
Glyma.14G175400 hypothetical protein AT1G22360:UGT85A2:UDP-glucosyl transferase 85A2 1Chr14:43313129–43315451 (-)3.575e-11
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)1.535e-15
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)1.072e-14
Glyma.14G177200 hypothetical protein AT4G09010:TL29:ascorbate peroxidase 4 1Chr14:43667263–43674131 (-)8.978e-11
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)2.119e-14
Glyma.14G178600 hypothetical protein NA 1Chr14:43963455–43970275 (+)9.772e-11
Glyma.14G178700 hypothetical protein NA 1Chr14:43978407–43980052 (+)9.772e-11
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 1Chr14:43987725–44003499 (-)9.772e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)1.001e-13
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.439e-11
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)6.246e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)6.246e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.805e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.805e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)9.239e-12
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)4.497e-13
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)4.497e-13
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.707e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)6.764e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)3.293e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.861e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.861e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)4.31e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)4.31e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)5.151e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.943e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.943e-12