Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04217

Metabolite ID
P04217
Deionized mass
348.5983 Da
Average m/z
349.6054
Average RT
8.0303
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.518e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.112e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.467e-13
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)4.231e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)5.563e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)3.597e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.518e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.518e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.518e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.518e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)6.21e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)6.21e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.21e-11
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)1.949e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.902e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)1.949e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.276e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)3.657e-12
Glyma.14G087900 hypothetical protein NA 1Chr14:7887761–7897469 (+)1.493e-11
Glyma.14G094500 hypothetical protein NA 1Chr14:8788109–8793948 (-)7.393e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.467e-13
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)8.834e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.952e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)3.733e-13
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.69e-11
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 1Chr18:55259873–55265930 (-)9.958e-11