Overview Annotation GWAS Evidence Associated genes

P04205

Metabolite ID
P04205
Deionized mass
187.1183 Da
Average m/z
188.1261
Average RT
8.0202
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G009300 hypothetical protein AT4G01890:AT4G01890:Pectin lyase-like superfamily protein__AT1G02460:AT1G02460:Pectin lyase-like superfamily protein 1Chr02:913657–916309 (+)9.594e-21
Glyma.02G009900 hypothetical protein NA 1Chr02:952027–953524 (+)4.564e-13
Glyma.08G275400 hypothetical protein NA 1Chr08:36550819–36553071 (+)6.176e-15
Glyma.08G275500 hypothetical protein AT2G22620:AT2G22620:Rhamnogalacturonate lyase family protein 1Chr08:36602032–36612019 (+)6.176e-15
Glyma.13G180900 hypothetical protein NA 1Chr13:29408246–29412677 (-)1.476e-16
Glyma.13G204400 hypothetical protein NA 1Chr13:31852699–31857082 (+)5.436e-12