Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04156

Metabolite ID
P04156
Deionized mass
292.5775 Da
Average m/z
293.5850
Average RT
7.9953
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)4.904e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.645e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.645e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.354e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.321e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.09e-13
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)5.51e-14
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)5.51e-14
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)4.797e-11
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)4.797e-11
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)4.797e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)1.323e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.598e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.598e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.598e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.598e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.072e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.463e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)8.046e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.042e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.042e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.645e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.971e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.784e-11
Glyma.20G009300 hypothetical protein NA 1Chr20:824176–827023 (+)7.428e-11