Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04064

Metabolite ID
P04064
Deionized mass
333.1706 Da
Average m/z
334.1783
Average RT
7.9548
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)1.592e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.159e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.328e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)6.005e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.446e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.714e-14
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)1.804e-11
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr04:46279239–46297477 (-)8.101e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.256e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.626e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.284e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.898e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.919e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.919e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)1.667e-12
Glyma.08G114000 hypothetical protein AT5G46430:AT5G46430:Ribosomal protein L32e 1Chr08:8737686–8739958 (+)1.844e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.17e-12
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.159e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)9.973e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)6.053e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.35e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.965e-13
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)2.734e-12
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)2.734e-12
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)2.734e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)8.331e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)3.729e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)3.729e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.79e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.12e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.328e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)7.295e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.959e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.076e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.002e-12
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 1Chr16:36437330–36445131 (+)8.524e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.369e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.731e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.557e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.557e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.358e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.128e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)8.412e-11