Overview Annotation GWAS Evidence Associated genes

P03920

Metabolite ID
P03920
Deionized mass
189.0636 Da
Average m/z
190.0694
Average RT
7.8996
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)6.18e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.29e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.083e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.882e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.252e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.726e-11
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)8.814e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)8.814e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)8.814e-11