Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P03848

Metabolite ID
P03848
Deionized mass
260.1360 Da
Average m/z
261.1422
Average RT
7.8764
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G032400 hypothetical protein AT1G21640:NADK2:NAD kinase 2 2Chr13:10365449–10376174 (-)6.312e-13
Glyma.13G036400 hypothetical protein AT1G76990:ACR3:ACT domain repeat 3 2Chr13:11425413–11437146 (+)6.312e-13
Glyma.13G040600 hypothetical protein AT5G53310:AT5G53310:myosin heavy chain-like protein 2Chr13:12931343–12943367 (+)6.312e-13
Glyma.19G104300 hypothetical protein NA 2Chr19:35345749–35366060 (+)5.221e-13
Glyma.13G031500 hypothetical protein AT1G44110:CYCA1;1:Cyclin A1;1 1Chr13:10229246–10234028 (+)6.312e-13
Glyma.13G031600 hypothetical protein NA 1Chr13:10243883–10250791 (+)6.311e-13
Glyma.13G031700 hypothetical protein NA 1Chr13:10255501–10258532 (-)6.311e-13
Glyma.13G032100 hypothetical protein NA 1Chr13:10313707–10316175 (-)6.312e-13
Glyma.13G032300 hypothetical protein AT4G19610:AT4G19610:nucleotide/nucleic acid binding protein__AT5G08695:AT5G08695:RNA-binding (RRM/RBD/RNP motifs) famil… 1Chr13:10349300–10360514 (-)6.312e-13
Glyma.13G032500 hypothetical protein AT1G21610:AT1G21610:wound-responsive family protein 1Chr13:10379385–10393174 (-)6.312e-13
Glyma.13G033600 hypothetical protein NA 1Chr13:10575983–10578863 (+)6.311e-13
Glyma.13G033700 hypothetical protein NA 1Chr13:10577767–10578778 (+)6.311e-13
Glyma.13G034000 hypothetical protein NA 1Chr13:10656555–10657331 (-)6.312e-13
Glyma.13G034100 hypothetical protein AT5G20240:PI:K-box region and MADS-box transcription factor family protein 1Chr13:10667998–10673471 (+)6.312e-13
Glyma.13G034600 hypothetical protein NA 1Chr13:10786137–10795390 (+)6.311e-13
Glyma.13G035200 hypothetical protein AT1G77120:ADH1:alcohol dehydrogenase 1 1Chr13:10928700–10935155 (+)6.312e-13
Glyma.13G035400 hypothetical protein NA 1Chr13:10967688–10986565 (+)6.311e-13
Glyma.13G035500 hypothetical protein AT1G77230:AT1G77230:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:10987744–10996313 (-)6.311e-13
Glyma.13G035700 hypothetical protein NA 1Chr13:11104751–11109149 (-)6.312e-13
Glyma.13G035800 hypothetical protein NA 1Chr13:11163860–11169153 (+)6.312e-13
Glyma.13G036200 hypothetical protein NA 1Chr13:11338195–11340331 (-)6.312e-13
Glyma.13G036300 hypothetical protein NA 1Chr13:11406312–11416269 (+)6.312e-13
Glyma.13G036800 hypothetical protein AT1G43890:RAB18:RAB GTPASE HOMOLOG B18 1Chr13:11490072–11497385 (-)6.312e-13
Glyma.13G036900 hypothetical protein NA 1Chr13:11534440–11535219 (+)6.312e-13
Glyma.13G037300 hypothetical protein AT5G25800:AT5G25800:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr13:11627463–11638646 (-)6.312e-13
Glyma.13G037400 hypothetical protein NA 1Chr13:11674345–11678672 (+)6.312e-13
Glyma.13G037600 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr13:11706789–11719329 (-)6.312e-13
Glyma.13G037700 hypothetical protein NA 1Chr13:11709400–11713858 (+)6.312e-13
Glyma.13G038200 hypothetical protein NA 1Chr13:11815808–11818199 (+)6.312e-13
Glyma.13G038600 SACPD stearoyl-acyl carrier protein desaturase AT1G43800:FTM1:Plant stearoyl-acyl-carrier-protein desaturase family protein 1Chr13:11956631–11959361 (-)6.312e-13
Glyma.13G039500 hypothetical protein NA 1Chr13:12229285–12231327 (-)6.311e-13
Glyma.13G040100 hypothetical protein AT5G53210:SPCH:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr13:12532178–12536107 (+)6.312e-13
Glyma.13G040400 hypothetical protein NA 1Chr13:12875981–12877773 (+)6.311e-13
Glyma.13G040700 hypothetical protein NA 1Chr13:12944725–12945256 (+)6.312e-13
Glyma.13G041100 hypothetical protein NA 1Chr13:13133244–13137306 (+)6.312e-13
Glyma.13G041200 hypothetical protein AT5G24120:SIGE:sigma factor E 1Chr13:13162176–13168574 (+)6.312e-13
Glyma.13G041500 hypothetical protein AT5G53180:PTB2:polypyrimidine tract-binding protein 2 1Chr13:13324872–13331513 (+)6.312e-13
Glyma.13G041700 hypothetical protein AT5G53170:FTSH11:FTSH protease 11 1Chr13:13342215–13357011 (+)6.312e-13
Glyma.13G042100 hypothetical protein AT5G53140:AT5G53140:Protein phosphatase 2C family protein 1Chr13:13516047–13530998 (-)6.312e-13
Glyma.13G042400 hypothetical protein NA 1Chr13:13558124–13561241 (+)6.312e-13
Glyma.13G042600 hypothetical protein AT5G64300:GCH:GTP cyclohydrolase II 1Chr13:13569710–13577998 (-)6.311e-13
Glyma.13G042700 hypothetical protein NA 1Chr13:13579883–13588272 (-)6.312e-13
Glyma.13G043700 hypothetical protein NA 1Chr13:13702272–13712017 (+)6.31e-13
Glyma.17G100700 hypothetical protein AT1G74470:AT1G74470:Pyridine nucleotide-disulfide oxidoreductase family protein 1Chr17:7921514–7924660 (-)6.675e-13
Glyma.19G102100 hypothetical protein AT3G02020:AK3:aspartate kinase 3 1Chr19:35013345–35023103 (+)5.221e-13
Glyma.19G103200 hypothetical protein AT3G26720:AT3G26720:Glycosyl hydrolase family 38 protein 1Chr19:35132887–35151079 (-)5.221e-13
Glyma.19G103800 hypothetical protein NA 1Chr19:35239153–35240209 (-)5.221e-13