Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P03826

Metabolite ID
P03826
Deionized mass
330.0579 Da
Average m/z
331.0650
Average RT
7.8638
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.709e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.965e-12
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)1.173e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.019e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.019e-14
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)3.343e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 2Chr13:31727841–31735910 (-)6.138e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.799e-14
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)1.297e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.57e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.57e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.523e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.049e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)4.777e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)4.414e-12
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)4.414e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)4.414e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)4.414e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)6.308e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.431e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.431e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.72e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.027e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.949e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.949e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.965e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.35e-11
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)9.15e-12
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)3.934e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.902e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.902e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.019e-14
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)4.298e-11
Glyma.13G200700 hypothetical protein NA 1Chr13:31431165–31434011 (-)3.381e-11
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)1.11e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.328e-11
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)6.138e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.556e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)4.107e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.799e-14
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.234e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.431e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.431e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.086e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)1.955e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)3.667e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.249e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.729e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.181e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.708e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)3.916e-11
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)5.029e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)7.09e-12
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)1.051e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.542e-11
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)5.064e-12