Overview Annotation GWAS Evidence Associated genes

P03809

Metabolite ID
P03809
Deionized mass
505.1779 Da
Average m/z
506.1830
Average RT
7.8566
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 4Chr16:26324650–26336836 (+)5.416e-16
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)7.802e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)8.255e-14
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)3.054e-14
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)2.946e-12
Glyma.05G222900 hypothetical protein AT4G29490:AT4G29490:Metallopeptidase M24 family protein 1Chr05:40226295–40233649 (-)1.498e-12
Glyma.07G188700 hypothetical protein AT2G17140:AT2G17140:Pentatricopeptide repeat (PPR) superfamily protein 1Chr07:35620405–35623451 (-)7.177e-12
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)4.62e-13
Glyma.11G154900 PRP3 NA 1Chr11:12643089–12645488 (+)1.878e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)6.486e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)4.52e-11
Glyma.16G114900 hypothetical protein NA 1Chr16:25456379–25485759 (+)7.274e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)4.359e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)8.876e-13
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 1Chr16:25905311–25906957 (-)3.192e-15
Glyma.16G117000 hypothetical protein NA 1Chr16:26140411–26140830 (+)2.28e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)3.054e-14
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)7.802e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)7.802e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.059e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.138e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.215e-11